Predicted CRMCs of Homo sapiens, version 2 (hg38)

• Contains 1,426,947 CRMs and 95,717,222 TFBSs (or 35,852,741 non-overlapping TFBS islands) in 85.5% of the human genome, predicted using 11,348 TF ChIP-seq datasets
• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

Human_CRMCs_TFBSs_v2_hg38.bed.tar.gz(1.4G)

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Predicted CRMCs of Homo sapiens, version 1 (hg38)

• Contains 1,404,973 CRMs and 90,671,016 TFBSs in 77.5% of the human genome, predicted using 6,092 TF ChIP-seq datasets
• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

Human_CRMCs_TFBSs_v1_hg38.bed.tar.gz(1.4G)

Predicted CRMCs of Mus musculus, version 2 (mm10)

• Contains 912,197 CRMs and 125,113,756 TFBSs (or 38,554,729 non-overlapping TFBS islands) in 77.9% of the mouse genome, predicted using 9,060 TF ChIP-seq datasets
• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

Mouse_CRMCs_TFBSs_v2_mm10.bed.tar.gz(1.9G)

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Predicted CRMCs of Mus musculus, version 2, liftover to mm39

• Coordinates of CRMs
• Scores/p values of CRMs

Mouse_CRMCs_v2_mm39.bed.tar.gz(13M)

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Predicted CRMCs of Mus musculus, version 1 (mm10)

• Contains 920,068 CRMs and 104,251,155 TFBSs in 70.3% of the mouse genome, predicted using 4,786TF ChIP-seq datasets.
• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

Mouse_CRMCs_TFBSs_v1_mm10.bed.tar.gz(1.6G)

Predicted CRMs of Caenorhabditis elegans(ce10) at p value=0.05 (score cutoff=275)

• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

ce10_v1.tar.gz(35M)

Predicted CRMs of Arabidopsis thaliana (tair10) at p value=0.05

• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

tair10_v1.tar.gz

Predicted CRMs of Drosophila melanogaster (dm3)

• Coordinates of CRMs
• Coordinates of TFBSs in CRMs
• Scores/p values of CRMs

dm3_v1.tar.gz